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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805756.1_cds_XP_016494067.1_8512
CDS Infomation

[gene=LOC107813325] [db_xref=GeneID:107813325] [protein=UPF0505 protein C16orf62 homolog isoform X3] [protein_id=XP_016494067.1] [location=complement(join(9808..9825,9900..9980,14478..14567,14654..14842,18244..18416,23718..23887,24753..24849,25465..25621,26386..26570,27381..27411,27968..28009))] [gbkey=CDS]
Sequence

ATGCAAAAATTTCCTGTCTCCAAAATGATTTCTGTTTCTTCGCTGTCAAGCTCAATTATG
AAGACAGGCAAGGGCACTGAGAAACCCTCAGCAAATGCACATCTAGAGGAGCTAGATGAT
CCTCAGAGATTTGCTGAAGAAGGCATTAAATATATCACCCTGCAGGAGTATGTCTCACGC
TTAACTGAACTTAAAGATGAAATTAGTCGTGCCTGGCATGCAAACGACCGCATAACCTCC
TTTAATTTTTCAATCAAGGTTGCTAAGCTACTGTCGGATACATCTATACTACAATTTTAT
CCAACGCTATTTGTCCTAGCTACAGAAATACTAGATATGTTAGGGGATATGGTATGGGAA
CGCATCAGGCAGAAAGCTGAATACACTGAAGATGGGACATTGGTCCATTTACCAGATAAC
TTTCGAGCAACTGAAATCTGTGCTGAAGCCAAAGAAACCTGCTACAACTGGTTCTTCAAA
GTTGGTTCCATCCGCGAGCTATTGCCACGCATATACTTGGAGCTAGCCATATTCCATTGC
TGGCGTTTCCTTTTGCAAAAACCTGCTGATAATCTTCCACGACTAGTTATGATGGCGAGA
GGCATTGCAGATCCATTAGTTTCGTTTTATTGCCGCTTATATTTGGCCCACTGTGCACAA
AAGTTACCTCAACGGGATATAGGACATCTGATAATTTCTATGAATGACATGAACACTCTT
CTGATGAATGGTGCACATATTGCATCTGTGAAGAAAACATCTGGAGTTTTATCAGGAAAT
CGAAGTTCAAAATTGGGCCTGATGGAACCAGCTATTGAATATGTTATGAAATGCTTGTTC
AGGGAGTCATGTGAGTTGCAAGTTGGAGAGATATTGATGGGGCTTGGACTTGGGAGGAAC
CAATCAGAGTTGTTTGGAAACGCATCATGCATCTCGCTTGTTCTTCACCATTTATTAAAG
GAACTTCCTATAGAAATAATTTTTTCTAATGCCTTGGACATTCTTCATCTCATTGAATGT
AGCTATGATTACTCCTTTGATCAGTGTTTGAATTTTAAGTTACTTGGACTCAGACTATGT
GAAAACATATCTCAAGTGAATGAAGTCAATTTGGTAATGAAGAAGGTTATTCAGGTTGTT
TCTCGGTTTAATAGCCTTGATGAGTACCTCAATGTTGTAGACGCTCATATAGATATTGCT
CTCCAGAAACACATGCTATGGTGCAAAGCATGA

Peptide Sequence

PEP ID

XP_016494067.1
PEP Infomation

PREDICTED: UPF0505 protein C16orf62 homolog isoform X3 [Nicotiana tabacum]
Sequence

MQKFPVSKMISVSSLSSSIMKTGKGTEKPSANAHLEELDDPQRFAEEGIKYITLQEYVSR
LTELKDEISRAWHANDRITSFNFSIKVAKLLSDTSILQFYPTLFVLATEILDMLGDMVWE
RIRQKAEYTEDGTLVHLPDNFRATEICAEAKETCYNWFFKVGSIRELLPRIYLELAIFHC
WRFLLQKPADNLPRLVMMARGIADPLVSFYCRLYLAHCAQKLPQRDIGHLIISMNDMNTL
LMNGAHIASVKKTSGVLSGNRSSKLGLMEPAIEYVMKCLFRESCELQVGEILMGLGLGRN
QSELFGNASCISLVLHHLLKELPIEIIFSNALDILHLIECSYDYSFDQCLNFKLLGLRLC
ENISQVNEVNLVMKKVIQVVSRFNSLDEYLNVVDAHIDIALQKHMLWCKA

Transcript Sequence

Gene sequence data has not been registered.